To do

ABCD Data

Participant where making variance failed - /home/groups/brainmri/abcd/data/HCP/derivatives/dcan_abcd_pipeline/sub-NDARINVXRHZDZE8/ses-baselineYear1Arm1/func/sub-NDARINVXRHZDZE8_ses-baselineYear1Arm1_task-rest_bold_timeseries.dtseries.nii - List went from 9975 to 9974 - summarize steps to get the list of participants - document an exemplify code to get the list

GUI_environments

For the ABCD data:

Try to see if you identify the mismatch

There is a mismatch in frame count for 1 study(ies): Error 1 out of 1 Study located in the row # 1254

Validating frames and parcellations for survivor 1254 out of 1907 /home/groups/brainmri/abcd/data/HCP/derivatives/dcan_abcd_pipeline/sub-NDARINVLKDHWPWF/ses-baselineYear1Arm1/func/sub-NDARINVLKDHWPWF_ses-baselineYear1Arm1_task-rest_bold_roi-GRP1_template_ROIs_timeseries.ptseries.nii /home/groups/brainmri/abcd/data/HCP/derivatives/dcan_abcd_pipeline/sub-NDARINVLKDHWPWF/ses-baselineYear1Arm1/func/sub-NDARINVLKDHWPWF_ses-baselineYear1Arm1_task-rest_bold_roi-Gordon2014FreeSurferSubcortical_timeseries.ptseries.nii /home/groups/brainmri/abcd/data/HCP/derivatives/dcan_abcd_pipeline/sub-NDARINVLKDHWPWF/ses-baselineYear1Arm1/func/sub-NDARINVLKDHWPWF_ses-baselineYear1Arm1_task-rest_bold_roi-HCP2016FreeSurferSubcortical_timeseries.ptseries.nii /home/groups/brainmri/abcd/data/HCP/derivatives/dcan_abcd_pipeline/sub-NDARINVLKDHWPWF/ses-baselineYear1Arm1/func/sub-NDARINVLKDHWPWF_ses-baselineYear1Arm1_task-rest_bold_roi-Markov2012FreeSurferSubcortical_timeseries.ptseries.nii /home/groups/brainmri/abcd/data/HCP/derivatives/dcan_abcd_pipeline/sub-NDARINVLKDHWPWF/ses-baselineYear1Arm1/func/sub-NDARINVLKDHWPWF_ses-baselineYear1Arm1_task-rest_bold_roi-Power2011FreeSurferSubcortical_timeseries.ptseries.nii /home/groups/brainmri/abcd/data/HCP/derivatives/dcan_abcd_pipeline/sub-NDARINVLKDHWPWF/ses-baselineYear1Arm1/func/sub-NDARINVLKDHWPWF_ses-baselineYear1Arm1_task-rest_bold_roi-Yeo2011FreeSurferSubcortical_timeseries.ptseries.nii